Are you SURE it's not completely uploaded ??
if it's not........ what is missing??
Not sure what your using to upload the site with, but a GOOD ftp program is definately a must. WS_FTP for windows, or Gftp for Linux are nice. There are several others, but they slip my mind as I usually only use one of the above, depending on which OS i'm using......
A little more detail would help in troubleshooting your problem.........