Are they messenger popups?
Popups will happen on the internet.. they're common..
If you're on some pretty shady pages you'll probably get LOTS of them.
We need more info.
Also try an alternative browser, IE is pathetic
If you're going to a page like google and getting a popup
1. Make sure the reference files for adaware are UPDATED
2. if that doesn't work try Spybot
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